Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm15413-201ENSMUST00000155101 1935 ntTSL 2 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm14036-201ENSMUST00000118248 480 ntBASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Mir1981-201ENSMUST00000157934 82 ntBASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm28894-201ENSMUST00000185214 615 ntBASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm37369-201ENSMUST00000194179 615 ntBASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm34701-201ENSMUST00000204213 849 ntBASIC8.94□□□□□ -0.98
Vps53Q8CCB4 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm38386-201ENSMUST00000194293 3421 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm7134-201ENSMUST00000122296 2406 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm15054-201ENSMUST00000117393 281 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm6689-201ENSMUST00000130905 481 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm23533-201ENSMUST00000157540 245 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm17047-201ENSMUST00000167709 430 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm43040-201ENSMUST00000202399 558 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm4898-201ENSMUST00000218519 832 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 4933409F18Rik-201ENSMUST00000221910 1267 ntTSL 5 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.93□□□□□ -0.98
Vps53Q8CCB4 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Vps53Q8CCB4 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps53Q8CCB4 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms