Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm26410-201ENSMUST00000157670 261 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm24083-201ENSMUST00000175174 120 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm27960-201ENSMUST00000183445 184 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm38079-201ENSMUST00000195603 154 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm43558-201ENSMUST00000200155 210 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm44809-201ENSMUST00000208305 993 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm45674-201ENSMUST00000210043 450 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm45514-201ENSMUST00000211531 689 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gsta3-201ENSMUST00000027067 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Slc12a8-201ENSMUST00000059056 3166 ntAPPRIS P2 TSL 2 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm38005-201ENSMUST00000194845 2745 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Fam228a-204ENSMUST00000222363 2284 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Ints14-202ENSMUST00000170517 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm11880-201ENSMUST00000117612 399 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm20397-201ENSMUST00000174520 362 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Mir7033-201ENSMUST00000184259 81 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm20770-201ENSMUST00000193474 694 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm40040-201ENSMUST00000196123 504 ntTSL 3 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 AC133183.2-201ENSMUST00000221543 280 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 AC154785.1-201ENSMUST00000223280 572 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.54□□□□□ -1.36
Rif1Q6PR54 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rif1Q6PR54 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Snrnp200-201ENSMUST00000103220 6745 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 1500004A13Rik-205ENSMUST00000184014 2135 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Fer-201ENSMUST00000000129 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 AC159813.1-201ENSMUST00000222671 2263 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC6.53□□□□□ -1.36
Rif1Q6PR54 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Abca8a-202ENSMUST00000100287 5619 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm44022-201ENSMUST00000203708 5429 ntBASIC6.53□□□□□ -1.36
Rif1Q6PR54 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm27684-201ENSMUST00000183778 80 ntBASIC6.53□□□□□ -1.36
Rif1Q6PR54 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm7839-201ENSMUST00000210755 673 ntBASIC6.53□□□□□ -1.36
Rif1Q6PR54 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm5612-201ENSMUST00000053326 375 ntBASIC6.53□□□□□ -1.36
Rif1Q6PR54 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Pax6-205ENSMUST00000111085 2779 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Ccnd2-201ENSMUST00000000188 6330 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm44037-201ENSMUST00000204816 1891 ntBASIC6.53□□□□□ -1.36
Rif1Q6PR54 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC6.53□□□□□ -1.36
Rif1Q6PR54 Cntn4-205ENSMUST00000113261 2904 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms