Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Gm36208-201ENSMUST00000220013 429 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC10.57□□□□□ -0.72
Clcn1Q64347 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Clcn1Q64347 AC163621.2-201ENSMUST00000222229 682 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC10.57□□□□□ -0.72
Clcn1Q64347 AC156790.3-201ENSMUST00000226200 254 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 AC161877.2-201ENSMUST00000226248 545 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 AC154692.1-201ENSMUST00000228314 544 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 Fabp5l2-201ENSMUST00000072582 408 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 Gm5560-201ENSMUST00000086918 892 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.57□□□□□ -0.72
Clcn1Q64347 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Ephx2-202ENSMUST00000224698 1985 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 Gm7942-201ENSMUST00000163216 1500 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Clcn1Q64347 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Gm13571-202ENSMUST00000151984 2127 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC10.57□□□□□ -0.72
Clcn1Q64347 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Clcn1Q64347 9130214F15Rik-201ENSMUST00000208727 1653 ntBASIC10.57□□□□□ -0.72
Clcn1Q64347 Tfpi-206ENSMUST00000111718 2027 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Clcn1Q64347 Lig3-203ENSMUST00000092849 4560 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Clcn1Q64347 Gm4890-201ENSMUST00000181030 3784 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm16223-201ENSMUST00000087332 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm18908-201ENSMUST00000207125 1483 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Nr6a1-201ENSMUST00000076275 5941 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Lrguk-201ENSMUST00000070189 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Fam90a1a-201ENSMUST00000110741 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm26377-201ENSMUST00000102184 108 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm13573-201ENSMUST00000116410 631 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm8569-201ENSMUST00000117630 647 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm15709-201ENSMUST00000118354 213 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm23079-201ENSMUST00000157847 117 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm6004-201ENSMUST00000173237 1116 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm6197-201ENSMUST00000192273 454 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm37187-201ENSMUST00000193425 341 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm30275-201ENSMUST00000197620 498 ntTSL 2 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm6064-201ENSMUST00000203999 454 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 AC154633.1-201ENSMUST00000223276 449 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm22362-201ENSMUST00000083102 134 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm26244-201ENSMUST00000083435 164 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Mir486-201ENSMUST00000093576 128 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm10805-201ENSMUST00000099710 399 ntBASIC10.56□□□□□ -0.72
Clcn1Q64347 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Trpm1-218ENSMUST00000206277 5076 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Clcn1Q64347 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Clcn1Q64347 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clcn1Q64347 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clcn1Q64347 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clcn1Q64347 Trim21-201ENSMUST00000033264 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clcn1Q64347 Ogdhl-201ENSMUST00000022480 3449 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Clcn1Q64347 Anapc1-203ENSMUST00000110333 4214 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Clcn1Q64347 Pcyt1a-203ENSMUST00000115137 4244 ntTSL 5 BASIC10.55□□□□□ -0.72
Clcn1Q64347 Trpv2-201ENSMUST00000018651 2909 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Clcn1Q64347 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Clcn1Q64347 Dicer1-201ENSMUST00000041987 9851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Clcn1Q64347 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms