Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm11855-201ENSMUST00000121562 1869 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm37611-201ENSMUST00000195250 2028 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm22439-201ENSMUST00000104048 132 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm6490-201ENSMUST00000111862 461 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm16221-201ENSMUST00000117331 393 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm37585-201ENSMUST00000195440 280 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm42723-201ENSMUST00000199966 1044 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm43558-201ENSMUST00000200155 210 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC7.53□□□□□ -1.2
Hoxa4P06798 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 AC157650.2-201ENSMUST00000224666 328 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 AC163038.4-201ENSMUST00000224942 474 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Hoxa4P06798 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm44950-201ENSMUST00000206403 2296 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Hoxa4P06798 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.53□□□□□ -1.2
Hoxa4P06798 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.2
Hoxa4P06798 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Hoxa4P06798 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
Hoxa4P06798 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
Hoxa4P06798 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
Hoxa4P06798 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.2
Hoxa4P06798 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.2
Hoxa4P06798 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm38302-201ENSMUST00000191676 2076 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm6491-201ENSMUST00000118273 990 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm15913-201ENSMUST00000118492 331 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm12593-201ENSMUST00000120981 743 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm11383-201ENSMUST00000121346 807 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm11188-201ENSMUST00000122382 388 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm24647-201ENSMUST00000157112 113 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 Mir1932-201ENSMUST00000157390 90 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.52□□□□□ -1.21
Hoxa4P06798 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.52□□□□□ -1.21
Hoxa4P06798 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC7.52□□□□□ -1.21
Hoxa4P06798 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Hoxa4P06798 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Hoxa4P06798 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.52□□□□□ -1.21
Hoxa4P06798 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.52□□□□□ -1.21
Hoxa4P06798 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Hoxa4P06798 Morn5-201ENSMUST00000028256 714 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms