Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Tmem177-201ENSMUST00000037906 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm23131-201ENSMUST00000104253 132 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm23987-201ENSMUST00000117039 129 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm11896-201ENSMUST00000121105 820 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm16260-201ENSMUST00000155141 304 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm17655-201ENSMUST00000167969 255 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm4246-201ENSMUST00000172822 216 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm27755-201ENSMUST00000184623 132 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm38051-201ENSMUST00000193740 433 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm42431-201ENSMUST00000196880 323 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm42472-201ENSMUST00000201626 859 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm18268-201ENSMUST00000208445 943 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm9689-201ENSMUST00000210009 428 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm19137-201ENSMUST00000213790 1164 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 AC132304.1-201ENSMUST00000218860 135 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm4120-201ENSMUST00000220456 578 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 AC134864.1-201ENSMUST00000226326 511 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 AC098742.1-201ENSMUST00000227945 373 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 AC122877.1-201ENSMUST00000228873 218 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Olfr815-201ENSMUST00000071557 951 ntBASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 G730013B05Rik-201ENSMUST00000180509 2176 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Pcdh19Q80TF3 AC117608.2-201ENSMUST00000224124 1363 ntBASIC8.09□□□□□ -1.12
Pcdh19Q80TF3 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
Pcdh19Q80TF3 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.09□□□□□ -1.12
Pcdh19Q80TF3 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC8.09□□□□□ -1.12
Pcdh19Q80TF3 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdh19Q80TF3 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Pcdh19Q80TF3 4930428N03Rik-204ENSMUST00000224456 3212 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm42848-201ENSMUST00000201477 2022 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Abhd4-202ENSMUST00000180359 2508 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Numb-204ENSMUST00000117217 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm6300-201ENSMUST00000192393 1498 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm42905-201ENSMUST00000196237 1611 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm24340-201ENSMUST00000104208 97 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm4342-201ENSMUST00000118982 367 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm7031-201ENSMUST00000173709 919 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm29577-201ENSMUST00000186427 693 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm29184-201ENSMUST00000190038 334 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Gm18303-201ENSMUST00000190055 1176 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.08□□□□□ -1.12
Pcdh19Q80TF3 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms