Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm12361-201ENSMUST00000119806 1044 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm9143-201ENSMUST00000120745 745 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm8172-201ENSMUST00000120762 750 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm11258-201ENSMUST00000121086 1218 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm9286-201ENSMUST00000173586 508 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm37825-201ENSMUST00000193141 904 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm37371-201ENSMUST00000194837 392 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Mir7230-201ENSMUST00000195977 56 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 1700008B11Rik-201ENSMUST00000198145 634 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm2915-201ENSMUST00000222565 787 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 CT009515.2-201ENSMUST00000226126 736 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Olfr120-201ENSMUST00000077498 993 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Snhg17-209ENSMUST00000186993 3144 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.05□□□□□ -1.12
Trim43aQ3TL54 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Trim43aQ3TL54 Gm45358-201ENSMUST00000209492 2305 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm23358-201ENSMUST00000103887 110 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm5228-201ENSMUST00000117186 357 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm13407-201ENSMUST00000118256 360 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm26048-201ENSMUST00000157305 142 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm43555-201ENSMUST00000196588 310 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm23604-202ENSMUST00000198428 137 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm16273-201ENSMUST00000202238 268 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm19161-201ENSMUST00000217958 737 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.04□□□□□ -1.12
Trim43aQ3TL54 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim43aQ3TL54 AC126028.1-201ENSMUST00000226218 2123 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm37420-201ENSMUST00000195332 2912 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.03□□□□□ -1.12
Trim43aQ3TL54 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms