Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Tpm1P58771 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Tpm1P58771 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Tpm1P58771 n-R5s51-201ENSMUST00000104473 123 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm13407-201ENSMUST00000118256 360 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm6630-201ENSMUST00000119199 454 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm14450-201ENSMUST00000119984 240 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm13622-201ENSMUST00000120658 433 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm13649-201ENSMUST00000122325 606 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC8.36□□□□□ -1.07
Tpm1P58771 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.36□□□□□ -1.07
Tpm1P58771 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC8.36□□□□□ -1.07
Tpm1P58771 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Tpm1P58771 Gm6750-201ENSMUST00000189273 268 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Gm19035-202ENSMUST00000194575 959 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm23011-202ENSMUST00000197855 275 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm27680-202ENSMUST00000199221 807 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC8.36□□□□□ -1.07
Tpm1P58771 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC8.36□□□□□ -1.07
Tpm1P58771 AC154528.3-201ENSMUST00000228011 679 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Olfr120-201ENSMUST00000077498 993 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 A630095E13Rik-201ENSMUST00000093868 619 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.36□□□□□ -1.07
Tpm1P58771 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.36□□□□□ -1.07
Tpm1P58771 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Tpm1P58771 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Tpm1P58771 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Tpm1P58771 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Tpm1P58771 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Tpm1P58771 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.35□□□□□ -1.07
Tpm1P58771 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC8.35□□□□□ -1.07
Tpm1P58771 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.35□□□□□ -1.07
Tpm1P58771 Gm6100-201ENSMUST00000180253 403 ntBASIC8.35□□□□□ -1.07
Tpm1P58771 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC8.35□□□□□ -1.07
Tpm1P58771 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.35□□□□□ -1.07
Tpm1P58771 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC8.35□□□□□ -1.07
Tpm1P58771 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.35□□□□□ -1.07
Tpm1P58771 Gm35501-202ENSMUST00000215101 459 ntTSL 3 BASIC8.35□□□□□ -1.07
Tpm1P58771 Gm19161-201ENSMUST00000217958 737 ntBASIC8.35□□□□□ -1.07
Tpm1P58771 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.35□□□□□ -1.07
Tpm1P58771 AC154640.1-204ENSMUST00000227105 648 ntBASIC8.35□□□□□ -1.07
Tpm1P58771 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Tpm1P58771 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Tpm1P58771 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Tpm1P58771 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Tpm1P58771 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Tpm1P58771 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
Tpm1P58771 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC8.34□□□□□ -1.07
Tpm1P58771 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.34□□□□□ -1.07
Tpm1P58771 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC8.34□□□□□ -1.07
Tpm1P58771 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm5228-201ENSMUST00000117186 357 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Gm5883-201ENSMUST00000120735 495 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Gm12133-201ENSMUST00000121775 661 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm20694-201ENSMUST00000176943 404 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Mir6999-201ENSMUST00000183498 61 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm3142-201ENSMUST00000190107 414 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC8.34□□□□□ -1.07
Tpm1P58771 Gm45299-201ENSMUST00000210199 420 ntBASIC8.34□□□□□ -1.07
Tpm1P58771 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms