Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC164123.1-201ENSMUST00000213385 447 ntTSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm6150-201ENSMUST00000217775 577 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Gm7476-201ENSMUST00000220112 661 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Sdc1P18828 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm13137-201ENSMUST00000118035 345 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm11833-201ENSMUST00000118393 853 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm13006-201ENSMUST00000118683 214 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm10224-201ENSMUST00000119496 615 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm5809-201ENSMUST00000121854 529 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm14328-201ENSMUST00000122178 408 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Mir1907-201ENSMUST00000122509 90 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 n-R5s154-201ENSMUST00000122513 108 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.07□□□□□ -1.44
Sdc1P18828 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Ang-ps1-201ENSMUST00000162314 436 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm5459-201ENSMUST00000171235 798 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Mir6923-201ENSMUST00000184592 72 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm37822-201ENSMUST00000192618 1109 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm37012-201ENSMUST00000194991 1078 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm7879-202ENSMUST00000200338 635 ntTSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 A1cf-203ENSMUST00000224400 1204 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
Sdc1P18828 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm44167-201ENSMUST00000204957 1878 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Sdc1P18828 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.07□□□□□ -1.44
Sdc1P18828 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 AC166159.1-201ENSMUST00000227154 1380 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Sdc1P18828 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sdc1P18828 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Sdc1P18828 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms