Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Clrn2B2RVW2 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Plec-208ENSMUST00000080857 14959 ntTSL 5 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm22927-201ENSMUST00000104268 131 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Clrn2B2RVW2 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm6743-201ENSMUST00000117345 1066 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm15709-201ENSMUST00000118354 213 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm11416-201ENSMUST00000119111 863 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm24682-201ENSMUST00000158764 137 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm28580-201ENSMUST00000186767 88 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC8.81□□□□□ -1
Clrn2B2RVW2 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 AV026068-229ENSMUST00000225516 595 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 AC158981.1-201ENSMUST00000226943 1205 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 AC122459.3-201ENSMUST00000228508 1042 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Glycam1-204ENSMUST00000228895 641 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm10123-201ENSMUST00000075723 490 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm12183-201ENSMUST00000120566 1848 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Clrn2B2RVW2 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Clrn2B2RVW2 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm232-201ENSMUST00000216549 2559 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm13081-201ENSMUST00000121527 5599 ntBASIC8.81□□□□□ -1
Clrn2B2RVW2 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.81□□□□□ -1
Clrn2B2RVW2 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Clrn2B2RVW2 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Clrn2B2RVW2 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC8.81□□□□□ -1
Clrn2B2RVW2 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm14826-201ENSMUST00000121284 901 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm15644-201ENSMUST00000121764 387 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm12634-201ENSMUST00000122157 992 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm25989-201ENSMUST00000158761 133 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm8575-201ENSMUST00000210262 521 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm23054-201ENSMUST00000082804 162 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Ank3-219ENSMUST00000182437 3113 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC8.8□□□□□ -1
Clrn2B2RVW2 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm29761-201ENSMUST00000215964 1939 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC8.8□□□□□ -1
Clrn2B2RVW2 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.8□□□□□ -1
Clrn2B2RVW2 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Clrn2B2RVW2 Mstn-202ENSMUST00000191197 2461 ntTSL 5 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC8.79□□□□□ -1
Clrn2B2RVW2 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.79□□□□□ -1
Clrn2B2RVW2 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC8.79□□□□□ -1
Clrn2B2RVW2 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Clrn2B2RVW2 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Clrn2B2RVW2 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC8.79□□□□□ -1
Clrn2B2RVW2 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Clrn2B2RVW2 Gm37863-201ENSMUST00000194911 1457 ntBASIC8.79□□□□□ -1
Clrn2B2RVW2 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC8.79□□□□□ -1
Clrn2B2RVW2 Gm23007-201ENSMUST00000158951 177 ntBASIC8.79□□□□□ -1
Clrn2B2RVW2 Gm23139-201ENSMUST00000179454 132 ntBASIC8.79□□□□□ -1
Clrn2B2RVW2 Mir6921-201ENSMUST00000183719 80 ntBASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms