Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Acad12-201ENSMUST00000041252 3881 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Rimklb-206ENSMUST00000204731 3039 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ube3bQ9ES34 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Pla2g6-210ENSMUST00000174021 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm17791-201ENSMUST00000185660 1501 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm5681-201ENSMUST00000189217 1533 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm38276-201ENSMUST00000192446 1343 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm45262-201ENSMUST00000209917 1463 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm16409-201ENSMUST00000100510 747 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm23131-201ENSMUST00000104253 132 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm15176-201ENSMUST00000117734 135 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Mup-ps1-201ENSMUST00000120720 544 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm5883-201ENSMUST00000120735 495 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm9143-201ENSMUST00000120745 745 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm8172-201ENSMUST00000120762 750 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm12455-201ENSMUST00000121242 416 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm25320-201ENSMUST00000122551 324 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm25271-201ENSMUST00000157273 290 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm7031-201ENSMUST00000173709 919 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm25145-201ENSMUST00000177640 110 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm9149-201ENSMUST00000182724 1007 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm38395-201ENSMUST00000199904 830 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm42959-201ENSMUST00000202184 212 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm39121-201ENSMUST00000208847 525 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm45255-201ENSMUST00000209943 811 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm9689-201ENSMUST00000210009 428 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm45344-201ENSMUST00000211610 341 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 AC156832.3-201ENSMUST00000215591 435 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 AC160635.1-201ENSMUST00000216731 474 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 AC163041.2-201ENSMUST00000223082 573 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 AC133189.3-201ENSMUST00000226269 878 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 CT030662.1-201ENSMUST00000227380 232 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 AC167013.3-201ENSMUST00000228110 989 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Olfr1255-201ENSMUST00000057369 933 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Coro7-201ENSMUST00000038552 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Opn1sw-201ENSMUST00000080428 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Gm44937-201ENSMUST00000207705 2691 ntBASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Ube3bQ9ES34 AC158238.1-201ENSMUST00000216899 1965 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm6300-201ENSMUST00000192393 1498 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Gm42899-201ENSMUST00000197034 2667 ntBASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Ube3bQ9ES34 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms