Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 AC122878.1-201ENSMUST00000227716 1460 ntBASIC8.46□□□□□ -1.05
Cntn3Q07409 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC8.46□□□□□ -1.05
Cntn3Q07409 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cntn3Q07409 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cntn3Q07409 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cntn3Q07409 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cntn3Q07409 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm13407-201ENSMUST00000118256 360 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm13651-201ENSMUST00000119086 1110 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm11954-201ENSMUST00000121403 349 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm12005-201ENSMUST00000121451 379 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm14253-201ENSMUST00000122112 639 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm12864-201ENSMUST00000122207 1006 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm25845-201ENSMUST00000122588 310 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm23229-201ENSMUST00000157297 105 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm26351-201ENSMUST00000157532 232 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm25266-201ENSMUST00000158521 304 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Phf11d-202ENSMUST00000160425 1281 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm7393-201ENSMUST00000172650 739 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Mir6999-201ENSMUST00000183498 61 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm43765-201ENSMUST00000196303 893 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm44721-201ENSMUST00000206978 472 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm6909-201ENSMUST00000209825 989 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm45636-201ENSMUST00000210497 1064 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm45283-201ENSMUST00000210593 628 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm5173-201ENSMUST00000219616 950 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm8153-201ENSMUST00000219844 952 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 AC207128.2-202ENSMUST00000224010 808 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Ensa-201ENSMUST00000037983 3845 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 B020031H02Rik-201ENSMUST00000209977 3673 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC8.46□□□□□ -1.06
Cntn3Q07409 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm37334-201ENSMUST00000192325 2938 ntBASIC8.46□□□□□ -1.06
Cntn3Q07409 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Cntn3Q07409 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cntn3Q07409 Gm44255-201ENSMUST00000203456 2053 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Map3k13-201ENSMUST00000042065 6709 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm26254-201ENSMUST00000122491 118 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm24083-201ENSMUST00000175174 120 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm29663-201ENSMUST00000186962 853 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm29548-201ENSMUST00000187012 694 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm29240-201ENSMUST00000187248 286 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm28105-201ENSMUST00000187788 694 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm37669-201ENSMUST00000192184 820 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm38330-201ENSMUST00000192743 959 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm7115-201ENSMUST00000193706 832 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm38337-201ENSMUST00000193986 599 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm18445-201ENSMUST00000195502 774 ntBASIC8.45□□□□□ -1.06
Cntn3Q07409 Olfr214-202ENSMUST00000203867 1255 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC8.45□□□□□ -1.06
Cntn3Q07409 Gm5948-201ENSMUST00000219627 839 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms