Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm37150-201ENSMUST00000193900 2754 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Gm37199-201ENSMUST00000193881 4065 ntBASIC8.88□□□□□ -0.99
Col1a1P11087 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Col1a1P11087 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col1a1P11087 Lpar2-201ENSMUST00000034325 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Gm36938-201ENSMUST00000191612 2696 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.87□□□□□ -0.99
Col1a1P11087 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Col1a1P11087 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Col1a1P11087 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Gm25877-201ENSMUST00000104326 129 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm13183-201ENSMUST00000118615 789 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm12634-201ENSMUST00000122157 992 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm22882-201ENSMUST00000157749 124 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm16298-201ENSMUST00000161107 420 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm27014-201ENSMUST00000182658 937 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm28070-201ENSMUST00000191502 445 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm43546-201ENSMUST00000196721 943 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm43772-201ENSMUST00000202052 379 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm42713-201ENSMUST00000202709 945 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm44227-201ENSMUST00000203576 241 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm45136-201ENSMUST00000205793 943 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm18907-201ENSMUST00000209719 932 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 AC155270.1-202ENSMUST00000221503 352 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Gm18631-201ENSMUST00000223125 1043 ntBASIC8.87□□□□□ -0.99
Col1a1P11087 Adgrf4-204ENSMUST00000170723 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col1a1P11087 Osbpl6-203ENSMUST00000111930 3853 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col1a1P11087 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col1a1P11087 Gm43980-201ENSMUST00000204899 1612 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm44883-201ENSMUST00000206063 3258 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col1a1P11087 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC8.86□□□□□ -0.99
Col1a1P11087 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Col1a1P11087 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm15188-201ENSMUST00000121264 704 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm16026-205ENSMUST00000162923 641 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm9423-201ENSMUST00000183173 997 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 AC133203.1-201ENSMUST00000228241 301 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col1a1P11087 Sycp2l-201ENSMUST00000124093 2641 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col1a1P11087 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col1a1P11087 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.86□□□□□ -0.99
Col1a1P11087 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col1a1P11087 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Mat1a-203ENSMUST00000225720 3468 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Col1a1P11087 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col1a1P11087 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Col1a1P11087 Gm6987-201ENSMUST00000119319 428 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Gm12879-201ENSMUST00000120003 1182 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Trav8-2-201ENSMUST00000130122 337 ntBASIC8.85□□□□□ -0.99
Col1a1P11087 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms