Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm38164-201ENSMUST00000192810 330 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm19148-201ENSMUST00000197045 429 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm5309-201ENSMUST00000197416 677 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm43005-201ENSMUST00000199015 648 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm5981-201ENSMUST00000199912 487 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm46313-201ENSMUST00000220463 547 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 AC192616.1-201ENSMUST00000221922 132 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 AC207128.2-202ENSMUST00000224010 808 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Lepr-201ENSMUST00000037552 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Mgam2-ps-203ENSMUST00000216691 1709 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Gm15577-201ENSMUST00000144350 2293 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdh19Q80TF3 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 AC169038.1-201ENSMUST00000227378 1352 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Tbx5-201ENSMUST00000018407 3942 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Cdh26-201ENSMUST00000042092 2891 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 AC117656.3-203ENSMUST00000225007 1809 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Ugt1a6b-202ENSMUST00000113138 2303 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm13423-201ENSMUST00000117205 888 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm12387-201ENSMUST00000118573 955 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm12727-201ENSMUST00000119885 359 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm2214-201ENSMUST00000121333 330 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm11838-201ENSMUST00000121999 231 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm23819-201ENSMUST00000158744 109 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm8065-201ENSMUST00000164048 605 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm2877-201ENSMUST00000178248 1204 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm8321-201ENSMUST00000181691 980 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Mir6940-201ENSMUST00000183447 70 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm27288-201ENSMUST00000184215 80 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm27597-201ENSMUST00000184365 80 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm27506-201ENSMUST00000184558 80 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm27529-201ENSMUST00000184975 80 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm27907-201ENSMUST00000185101 80 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm20819-201ENSMUST00000191091 925 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm43245-201ENSMUST00000197603 468 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm18747-201ENSMUST00000198129 648 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm17850-201ENSMUST00000210023 1154 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm7839-201ENSMUST00000210755 673 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 AC162934.2-201ENSMUST00000221451 249 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 CT009515.2-201ENSMUST00000226126 736 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 AC101831.1-201ENSMUST00000228245 691 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 CT009550.3-201ENSMUST00000228542 455 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 1700024P04Rik-201ENSMUST00000054425 481 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm25135-201ENSMUST00000082648 143 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.11□□□□□ -1.11
Pcdh19Q80TF3 Rhpn2-202ENSMUST00000085556 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms