Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.41□□□□□ -1.06
Tpm1P58771 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.41□□□□□ -1.06
Tpm1P58771 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Tpm1P58771 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Tpm1P58771 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.4□□□□□ -1.06
Tpm1P58771 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Tpm1P58771 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.4□□□□□ -1.06
Tpm1P58771 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm23131-201ENSMUST00000104253 132 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Gm23946-201ENSMUST00000104423 197 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm11765-201ENSMUST00000121173 1205 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Gm11760-201ENSMUST00000122355 796 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm9458-201ENSMUST00000135273 727 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.4□□□□□ -1.06
Tpm1P58771 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC8.4□□□□□ -1.06
Tpm1P58771 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Gm23187-201ENSMUST00000175746 86 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC8.4□□□□□ -1.06
Tpm1P58771 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Tpm1P58771 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 AC122877.1-201ENSMUST00000228873 218 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Tpm1P58771 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Tpm1P58771 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC8.4□□□□□ -1.06
Tpm1P58771 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Gm43422-201ENSMUST00000199780 3571 ntBASIC8.4□□□□□ -1.06
Tpm1P58771 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Tpm1P58771 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Tpm1P58771 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Tpm1P58771 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.4□□□□□ -1.07
Tpm1P58771 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Tpm1P58771 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Tpm1P58771 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
Tpm1P58771 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Tpm1P58771 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC8.4□□□□□ -1.07
Tpm1P58771 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Tpm1P58771 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Tpm1P58771 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Tpm1P58771 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Tpm1P58771 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 n-R5s90-201ENSMUST00000103968 118 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Gm24257-201ENSMUST00000104472 131 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Gm13255-201ENSMUST00000117255 547 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Gm9095-201ENSMUST00000117607 881 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm6689-201ENSMUST00000130905 481 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Gm15941-204ENSMUST00000135401 726 ntTSL 3 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.39□□□□□ -1.07
Tpm1P58771 Scarna17-201ENSMUST00000158064 79 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm23927-202ENSMUST00000199928 216 ntBASIC8.39□□□□□ -1.07
Tpm1P58771 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Tpm1P58771 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.39□□□□□ -1.07
Tpm1P58771 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Tpm1P58771 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms