Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Msh6P54276 AC118249.1-201ENSMUST00000224822 608 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Msh6P54276 Gm11342-203ENSMUST00000224879 1324 ntBASIC9.71□□□□□ -0.86
Msh6P54276 Gm37460-201ENSMUST00000191796 2249 ntBASIC9.71□□□□□ -0.86
Msh6P54276 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Msh6P54276 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Msh6P54276 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Msh6P54276 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Msh6P54276 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Msh6P54276 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.7□□□□□ -0.86
Msh6P54276 Gm20045-201ENSMUST00000192658 5577 ntBASIC9.7□□□□□ -0.86
Msh6P54276 Wipf3-205ENSMUST00000163746 4102 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Msh6P54276 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Msh6P54276 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Msh6P54276 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Msh6P54276 Gm15105-201ENSMUST00000117777 204 ntBASIC9.7□□□□□ -0.86
Msh6P54276 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC9.7□□□□□ -0.86
Msh6P54276 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC9.7□□□□□ -0.86
Msh6P54276 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC9.7□□□□□ -0.86
Msh6P54276 Gm25660-201ENSMUST00000158470 104 ntBASIC9.7□□□□□ -0.86
Msh6P54276 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Msh6P54276 Mir6908-201ENSMUST00000184056 63 ntBASIC9.7□□□□□ -0.86
Msh6P54276 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC9.7□□□□□ -0.86
Msh6P54276 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC9.7□□□□□ -0.86
Msh6P54276 Gm38177-201ENSMUST00000192213 1040 ntBASIC9.7□□□□□ -0.86
Msh6P54276 Gm44902-201ENSMUST00000206177 805 ntBASIC9.7□□□□□ -0.86
Msh6P54276 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC9.7□□□□□ -0.86
Msh6P54276 AC159205.7-201ENSMUST00000225988 692 ntBASIC9.7□□□□□ -0.86
Msh6P54276 AC122459.3-201ENSMUST00000228508 1042 ntBASIC9.7□□□□□ -0.86
Msh6P54276 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Msh6P54276 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Msh6P54276 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Msh6P54276 Olfr1378-202ENSMUST00000213259 4324 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Msh6P54276 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Msh6P54276 Dgkh-204ENSMUST00000227767 3319 ntBASIC9.69□□□□□ -0.86
Msh6P54276 Gm43609-201ENSMUST00000199084 2712 ntBASIC9.69□□□□□ -0.86
Msh6P54276 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.69□□□□□ -0.86
Msh6P54276 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC9.69□□□□□ -0.86
Msh6P54276 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Htr4-201ENSMUST00000027560 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Msh6P54276 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC9.69□□□□□ -0.86
Msh6P54276 Gm15481-201ENSMUST00000120264 539 ntBASIC9.69□□□□□ -0.86
Msh6P54276 Gm14728-201ENSMUST00000122196 492 ntBASIC9.69□□□□□ -0.86
Msh6P54276 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC9.69□□□□□ -0.86
Msh6P54276 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC9.69□□□□□ -0.86
Msh6P54276 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Msh6P54276 Gm8539-201ENSMUST00000199822 501 ntBASIC9.69□□□□□ -0.86
Msh6P54276 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC9.69□□□□□ -0.86
Msh6P54276 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC9.69□□□□□ -0.86
Msh6P54276 Gm31711-201ENSMUST00000220687 196 ntBASIC9.69□□□□□ -0.86
Msh6P54276 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Msh6P54276 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm23054-201ENSMUST00000082804 162 ntBASIC9.69□□□□□ -0.86
Msh6P54276 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Msh6P54276 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Msh6P54276 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Msh6P54276 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms