Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC9.96□□□□□ -0.81
Col18a1P39061 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col18a1P39061 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Col18a1P39061 Phka2-201ENSMUST00000033652 4133 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col18a1P39061 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC9.96□□□□□ -0.81
Col18a1P39061 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Col18a1P39061 Pycard-201ENSMUST00000033056 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Col18a1P39061 L3mbtl2-201ENSMUST00000023029 3487 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC9.96□□□□□ -0.82
Col18a1P39061 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Map4k4-213ENSMUST00000193682 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Col18a1P39061 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Col18a1P39061 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Gm42973-201ENSMUST00000197913 3200 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Col18a1P39061 Gm15712-201ENSMUST00000120369 1156 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC9.96□□□□□ -0.82
Col18a1P39061 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Col18a1P39061 Gm6055-201ENSMUST00000180532 378 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 Gm9504-201ENSMUST00000196322 468 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 Gm5711-201ENSMUST00000197896 421 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC9.96□□□□□ -0.82
Col18a1P39061 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC9.96□□□□□ -0.82
Col18a1P39061 AC151904.2-201ENSMUST00000218683 1177 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC9.96□□□□□ -0.82
Col18a1P39061 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Col18a1P39061 n-R5s95-201ENSMUST00000082684 118 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Col18a1P39061 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Col18a1P39061 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Col18a1P39061 AC166574.5-201ENSMUST00000227438 1432 ntBASIC9.96□□□□□ -0.82
Col18a1P39061 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Col18a1P39061 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Col18a1P39061 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 AC165148.1-201ENSMUST00000224795 2372 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Mir674-201ENSMUST00000102421 100 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Gm17137-202ENSMUST00000165729 957 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Gm26528-201ENSMUST00000181965 283 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Gm28925-201ENSMUST00000188586 168 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Gm8924-201ENSMUST00000197405 1132 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Gm21040-201ENSMUST00000199493 1132 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Gm43905-201ENSMUST00000204516 204 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Gm45497-201ENSMUST00000211701 740 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Col18a1P39061 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Col18a1P39061 Gm9874-202ENSMUST00000194957 1464 ntBASIC9.95□□□□□ -0.82
Col18a1P39061 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Col18a1P39061 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 AC154522.1-201ENSMUST00000224647 1903 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm43196-201ENSMUST00000201762 2114 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm15127-202ENSMUST00000101190 1972 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm13282-201ENSMUST00000121577 545 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm24343-201ENSMUST00000158708 111 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Gm24824-201ENSMUST00000175097 78 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Mir7037-201ENSMUST00000184414 65 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Col18a1P39061 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms