Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm26801-201ENSMUST00000180591 1219 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm27186-201ENSMUST00000184223 307 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 Mir378d-201ENSMUST00000184232 110 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm28117-201ENSMUST00000188472 371 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm18562-201ENSMUST00000209949 915 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm4972-201ENSMUST00000211108 1254 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 AC132587.1-201ENSMUST00000220562 166 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 AC164424.3-201ENSMUST00000220809 148 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 AC166358.8-201ENSMUST00000223288 105 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 AC124739.1-201ENSMUST00000223433 148 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 AC116596.2-203ENSMUST00000227345 731 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Cps1Q8C196 n-R5s217-201ENSMUST00000083341 116 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 AC101875.1-201ENSMUST00000222666 2223 ntBASIC10.16□□□□□ -0.78
Cps1Q8C196 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Adgrl3-218ENSMUST00000122037 4649 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Cps1Q8C196 Gm10302-201ENSMUST00000174433 3535 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm4073-201ENSMUST00000176792 3500 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm14727-201ENSMUST00000118526 525 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm14721-201ENSMUST00000121381 525 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm11895-201ENSMUST00000122165 467 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Trav8-2-201ENSMUST00000130122 337 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm24781-201ENSMUST00000157636 117 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC10.15□□□□□ -0.78
Cps1Q8C196 Mir6911-201ENSMUST00000184241 69 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC10.15□□□□□ -0.78
Cps1Q8C196 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC10.15□□□□□ -0.78
Cps1Q8C196 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC10.15□□□□□ -0.78
Cps1Q8C196 Gm18960-201ENSMUST00000222962 713 ntBASIC10.15□□□□□ -0.78
Cps1Q8C196 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Luc7l-202ENSMUST00000114976 4934 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Cps1Q8C196 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Cps1Q8C196 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Cps1Q8C196 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Gm5903-201ENSMUST00000121836 2325 ntBASIC10.14□□□□□ -0.79
Cps1Q8C196 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Gm14513-201ENSMUST00000117403 123 ntBASIC10.14□□□□□ -0.79
Cps1Q8C196 Gm25556-201ENSMUST00000158077 144 ntBASIC10.14□□□□□ -0.79
Cps1Q8C196 Gm22728-201ENSMUST00000158087 129 ntBASIC10.14□□□□□ -0.79
Cps1Q8C196 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Gm43772-201ENSMUST00000202052 379 ntBASIC10.14□□□□□ -0.79
Cps1Q8C196 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC10.14□□□□□ -0.79
Cps1Q8C196 AC165155.1-201ENSMUST00000228932 445 ntBASIC10.14□□□□□ -0.79
Cps1Q8C196 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Cps1Q8C196 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
Cps1Q8C196 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Cps1Q8C196 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Cps1Q8C196 Gm24519-201ENSMUST00000104507 132 ntBASIC10.13□□□□□ -0.79
Cps1Q8C196 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Cps1Q8C196 Gm11257-201ENSMUST00000121313 315 ntBASIC10.13□□□□□ -0.79
Cps1Q8C196 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Cps1Q8C196 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 150.5 ms