Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.2□□□□□ -1.1
Usp4P35123 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Gm7337-202ENSMUST00000181439 2655 ntBASIC8.2□□□□□ -1.1
Usp4P35123 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.2□□□□□ -1.1
Usp4P35123 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Usp4P35123 Grik1-209ENSMUST00000227986 2942 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 BC030870-201ENSMUST00000098713 1507 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Gm44187-201ENSMUST00000204735 1929 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Gm15062-201ENSMUST00000120567 367 ntBASIC8.19□□□□□ -1.1
Usp4P35123 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC8.19□□□□□ -1.1
Usp4P35123 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Usp4P35123 Gm16103-201ENSMUST00000163003 1279 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Usp4P35123 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Gm26505-201ENSMUST00000176208 166 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Mir5623-201ENSMUST00000176631 70 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Gm37185-201ENSMUST00000193852 410 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Gm42472-201ENSMUST00000201626 859 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.19□□□□□ -1.1
Usp4P35123 Gm17909-201ENSMUST00000207587 907 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Gm30196-201ENSMUST00000208957 160 ntBASIC8.19□□□□□ -1.1
Usp4P35123 CT025630.3-201ENSMUST00000228798 835 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Usp4P35123 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Gm24919-201ENSMUST00000083020 106 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Usp4P35123 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Usp4P35123 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Gm19028-201ENSMUST00000189614 1873 ntBASIC8.19□□□□□ -1.1
Usp4P35123 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Usp4P35123 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.19□□□□□ -1.1
Usp4P35123 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Usp4P35123 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC8.18□□□□□ -1.1
Usp4P35123 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Gm44797-201ENSMUST00000208780 1837 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Usp4P35123 Gm25502-201ENSMUST00000104428 131 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm14561-201ENSMUST00000117376 798 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm7645-201ENSMUST00000119008 788 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm5761-201ENSMUST00000119238 834 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm9392-201ENSMUST00000119337 554 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm25265-201ENSMUST00000158520 347 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Usp4P35123 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Usp4P35123 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC8.18□□□□□ -1.1
Usp4P35123 Gm27435-201ENSMUST00000183588 88 ntBASIC8.18□□□□□ -1.1
Usp4P35123 Gm38328-201ENSMUST00000195582 317 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms