Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Gm12661-201ENSMUST00000118780 3335 ntBASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Upk3aQ9JKX8 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm22660-201ENSMUST00000104193 130 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm24373-201ENSMUST00000104393 132 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm12642-201ENSMUST00000121098 876 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm12632-201ENSMUST00000121223 495 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm24738-201ENSMUST00000158856 123 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm25164-201ENSMUST00000158908 116 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm9141-201ENSMUST00000159355 1007 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm26784-201ENSMUST00000181666 410 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm28983-201ENSMUST00000186685 614 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm28150-201ENSMUST00000187305 614 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm28377-201ENSMUST00000189695 720 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm19028-201ENSMUST00000189614 1873 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm43515-201ENSMUST00000197930 2141 ntBASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Fam49a-205ENSMUST00000223061 1782 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Upk3aQ9JKX8 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm45737-201ENSMUST00000208344 1612 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm37706-201ENSMUST00000195379 2765 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm11558-201ENSMUST00000118454 459 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm11895-201ENSMUST00000122165 467 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm15843-201ENSMUST00000146593 529 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm27542-201ENSMUST00000184184 256 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm29355-201ENSMUST00000188178 697 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm28953-201ENSMUST00000188336 697 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm20788-201ENSMUST00000190538 697 ntBASIC7.35□□□□□ -1.23
Upk3aQ9JKX8 Gm37395-201ENSMUST00000194721 697 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms