Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm9936-201ENSMUST00000201635 2925 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Foxn1-201ENSMUST00000108294 3214 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm45793-201ENSMUST00000207900 1342 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 CT025642.3-201ENSMUST00000225503 4086 ntBASIC9.77□□□□□ -0.84
RtcbQ99LF4 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
RtcbQ99LF4 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm25344-201ENSMUST00000104503 132 ntBASIC9.77□□□□□ -0.85
RtcbQ99LF4 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm7746-201ENSMUST00000120966 503 ntBASIC9.77□□□□□ -0.85
RtcbQ99LF4 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC9.77□□□□□ -0.85
RtcbQ99LF4 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm29588-201ENSMUST00000185738 298 ntBASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm29516-201ENSMUST00000190402 468 ntBASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm38030-201ENSMUST00000192376 475 ntBASIC9.77□□□□□ -0.85
RtcbQ99LF4 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm44245-201ENSMUST00000204304 232 ntBASIC9.77□□□□□ -0.85
RtcbQ99LF4 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Gm24919-201ENSMUST00000083020 106 ntBASIC9.77□□□□□ -0.85
RtcbQ99LF4 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
RtcbQ99LF4 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm45714-201ENSMUST00000211466 2722 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm45289-201ENSMUST00000211048 2577 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Ctbp2-214ENSMUST00000169570 3604 ntTSL 5 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Ankrd55-201ENSMUST00000022275 2412 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm18300-201ENSMUST00000192792 1406 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm23323-201ENSMUST00000104471 133 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm13525-201ENSMUST00000120607 478 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm371-201ENSMUST00000142240 1245 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm19791-201ENSMUST00000180398 859 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm6472-202ENSMUST00000187973 582 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm29161-201ENSMUST00000188250 699 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm28164-201ENSMUST00000190143 442 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm8489-201ENSMUST00000209876 1152 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Gm18972-201ENSMUST00000218873 630 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 AC116589.9-201ENSMUST00000221462 908 ntBASIC9.76□□□□□ -0.85
RtcbQ99LF4 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
RtcbQ99LF4 Olfr1153-201ENSMUST00000052300 957 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms