Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm43093-201ENSMUST00000202439 1213 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm44688-201ENSMUST00000209083 537 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC8.38□□□□□ -1.07
Sox1P53783 Gm45725-201ENSMUST00000212962 337 ntBASIC8.38□□□□□ -1.07
Sox1P53783 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC8.38□□□□□ -1.07
Sox1P53783 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Gm8275-201ENSMUST00000219732 424 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm6841-201ENSMUST00000220602 598 ntBASIC8.38□□□□□ -1.07
Sox1P53783 AC144733.1-201ENSMUST00000222893 1289 ntBASIC8.38□□□□□ -1.07
Sox1P53783 AC154594.1-201ENSMUST00000225171 1273 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Sox1P53783 AC154323.1-201ENSMUST00000228329 1231 ntBASIC8.38□□□□□ -1.07
Sox1P53783 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Sox1P53783 Gm23448-201ENSMUST00000083151 104 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Sox1P53783 Foxn3-201ENSMUST00000046859 7705 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Tcf7l2-212ENSMUST00000111659 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Tdpoz1-202ENSMUST00000181541 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Ddx24-206ENSMUST00000221211 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Sox1P53783 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Ifit1bl1-201ENSMUST00000112467 2193 ntAPPRIS P5 TSL 3 BASIC8.38□□□□□ -1.07
Sox1P53783 Gm44005-201ENSMUST00000203186 3173 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC8.38□□□□□ -1.07
Sox1P53783 Gm37262-201ENSMUST00000192816 1818 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
Sox1P53783 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Gm38056-201ENSMUST00000193928 5027 ntBASIC8.38□□□□□ -1.07
Sox1P53783 Styk1-201ENSMUST00000049150 3380 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sox1P53783 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Gm9903-201ENSMUST00000181102 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Cenpu-201ENSMUST00000034045 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Peg13-201ENSMUST00000202826 4725 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Snx32-201ENSMUST00000070172 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Sox1P53783 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Kprp-201ENSMUST00000072363 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Hcar1-201ENSMUST00000164267 3285 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Sox1P53783 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Sox1P53783 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Sox1P53783 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Gm14772-201ENSMUST00000116562 514 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Gm12993-201ENSMUST00000119900 479 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.37□□□□□ -1.07
Sox1P53783 Gm18416-201ENSMUST00000175635 1003 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Clasp1-214ENSMUST00000189570 5502 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Sox1P53783 Gm29072-201ENSMUST00000191149 678 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC8.37□□□□□ -1.07
Sox1P53783 Gm38200-201ENSMUST00000192083 2111 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Gm38051-201ENSMUST00000193740 433 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.37□□□□□ -1.07
Sox1P53783 Mir7230-201ENSMUST00000195977 56 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC8.37□□□□□ -1.07
Sox1P53783 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC8.37□□□□□ -1.07
Sox1P53783 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.37□□□□□ -1.07
Sox1P53783 AL929265.1-201ENSMUST00000213427 125 ntBASIC8.37□□□□□ -1.07
Sox1P53783 AC118476.2-201ENSMUST00000215206 757 ntTSL 3 BASIC8.37□□□□□ -1.07
Sox1P53783 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC8.37□□□□□ -1.07
Sox1P53783 Gm3333-202ENSMUST00000221763 1044 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Platr25-208ENSMUST00000222602 939 ntBASIC8.37□□□□□ -1.07
Sox1P53783 AC154633.1-201ENSMUST00000223276 449 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Sox1P53783 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.37□□□□□ -1.07
Sox1P53783 Olfr1045-201ENSMUST00000099904 948 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Sox1P53783 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Olfr1350-203ENSMUST00000219278 1768 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Pparg-201ENSMUST00000000450 1767 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC8.37□□□□□ -1.07
Sox1P53783 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Sox1P53783 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms