Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gja10-202ENSMUST00000219644 1857 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Gm40309-201ENSMUST00000202699 1752 ntBASIC9.8□□□□□ -0.84
RtcbQ99LF4 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Gm9776-201ENSMUST00000059598 2980 ntBASIC9.8□□□□□ -0.84
RtcbQ99LF4 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Gm37873-201ENSMUST00000194571 2280 ntBASIC9.8□□□□□ -0.84
RtcbQ99LF4 Gm7562-201ENSMUST00000210502 2537 ntBASIC9.8□□□□□ -0.84
RtcbQ99LF4 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Mas1-201ENSMUST00000089015 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
RtcbQ99LF4 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
RtcbQ99LF4 St7-201ENSMUST00000000674 1818 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Lrrc32-201ENSMUST00000165205 3817 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm37367-201ENSMUST00000191771 2602 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm12591-201ENSMUST00000122407 1177 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm6522-201ENSMUST00000197160 1203 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm9604-201ENSMUST00000211175 433 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 AC122539.1-201ENSMUST00000219925 329 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm7239-201ENSMUST00000220981 860 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 AL590616.1-201ENSMUST00000223339 574 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 AC106830.2-201ENSMUST00000226624 943 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm8177-201ENSMUST00000181591 1336 ntBASIC9.79□□□□□ -0.84
RtcbQ99LF4 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
RtcbQ99LF4 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm12394-201ENSMUST00000107981 3348 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm44080-201ENSMUST00000204451 2214 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Mir669o-201ENSMUST00000103898 96 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm11348-201ENSMUST00000118813 318 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm13444-201ENSMUST00000119445 522 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm13466-201ENSMUST00000121515 999 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm11263-201ENSMUST00000121853 749 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm25989-201ENSMUST00000158761 133 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm16102-201ENSMUST00000160955 420 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm22408-201ENSMUST00000174925 65 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm18875-201ENSMUST00000188563 882 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 AC122251.1-201ENSMUST00000227717 639 ntBASIC9.78□□□□□ -0.84
RtcbQ99LF4 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
RtcbQ99LF4 Fbxo11-201ENSMUST00000005504 4019 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
RtcbQ99LF4 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 182.5 ms