Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Fdft1P53798 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Fdft1P53798 AC183268.1-201ENSMUST00000215753 2837 ntBASIC7.67□□□□□ -1.18
Fdft1P53798 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
Fdft1P53798 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Fdft1P53798 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Fdft1P53798 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.67□□□□□ -1.18
Fdft1P53798 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Fdft1P53798 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Fdft1P53798 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Fdft1P53798 Gm44141-201ENSMUST00000204231 1583 ntBASIC7.67□□□□□ -1.18
Fdft1P53798 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Fdft1P53798 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Fdft1P53798 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Fdft1P53798 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Fdft1P53798 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Fdft1P53798 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm37080-201ENSMUST00000194804 2404 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm43750-201ENSMUST00000199027 2493 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm13325-201ENSMUST00000118746 806 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm13323-201ENSMUST00000120245 1151 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm12692-201ENSMUST00000121092 546 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm14830-201ENSMUST00000121899 700 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm13649-201ENSMUST00000122325 606 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm25721-201ENSMUST00000157496 171 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm22847-201ENSMUST00000157707 105 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm23220-201ENSMUST00000158115 137 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm25372-201ENSMUST00000158161 255 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm44245-201ENSMUST00000204304 232 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC7.66□□□□□ -1.18
Fdft1P53798 AC153561.1-201ENSMUST00000215943 469 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 AV026068-225ENSMUST00000225042 490 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm44746-201ENSMUST00000205565 1349 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 AC107757.2-201ENSMUST00000226370 1466 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm45512-201ENSMUST00000210432 1553 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Fdft1P53798 Gm28583-201ENSMUST00000188903 2141 ntBASIC7.66□□□□□ -1.18
Fdft1P53798 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Fdft1P53798 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Fdft1P53798 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
Fdft1P53798 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.65□□□□□ -1.18
Fdft1P53798 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Fdft1P53798 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
Fdft1P53798 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Fdft1P53798 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm13255-201ENSMUST00000117255 547 ntBASIC7.65□□□□□ -1.18
Fdft1P53798 Gm13526-201ENSMUST00000117970 189 ntBASIC7.65□□□□□ -1.18
Fdft1P53798 Gm12993-201ENSMUST00000119900 479 ntBASIC7.65□□□□□ -1.18
Fdft1P53798 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC7.65□□□□□ -1.18
Fdft1P53798 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Fdft1P53798 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.65□□□□□ -1.18
Fdft1P53798 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.65□□□□□ -1.18
Fdft1P53798 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms