Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 AC124395.1-201ENSMUST00000225940 707 ntBASIC10.02□□□□□ -0.81
Col18a1P39061 AC125405.2-201ENSMUST00000227862 383 ntBASIC10.02□□□□□ -0.81
Col18a1P39061 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Col18a1P39061 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC10.02□□□□□ -0.81
Col18a1P39061 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 St6gal1-206ENSMUST00000178797 4177 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Col18a1P39061 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 Gm26967-201ENSMUST00000182878 2303 ntBASIC10.02□□□□□ -0.81
Col18a1P39061 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 4430402I18Rik-208ENSMUST00000179171 2638 ntTSL 5 BASIC10.02□□□□□ -0.81
Col18a1P39061 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Col18a1P39061 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Col18a1P39061 Gm29681-201ENSMUST00000198696 4233 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Cblb-206ENSMUST00000227879 3866 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Col18a1P39061 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm16221-201ENSMUST00000117331 393 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm13141-201ENSMUST00000117417 456 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm24687-201ENSMUST00000157758 241 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm20396-201ENSMUST00000173358 745 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm28416-201ENSMUST00000188334 292 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm28586-201ENSMUST00000189857 456 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm38173-201ENSMUST00000193126 2314 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Map4k4-218ENSMUST00000195860 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm18980-201ENSMUST00000199098 1079 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm33178-201ENSMUST00000212090 257 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm9585-201ENSMUST00000219681 1404 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 AC121542.2-201ENSMUST00000227529 400 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm22351-201ENSMUST00000083925 107 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm14896-201ENSMUST00000121311 1351 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Nrxn3-202ENSMUST00000110130 3654 ntTSL 2 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Adcy9-202ENSMUST00000117801 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col18a1P39061 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm11501-201ENSMUST00000118039 581 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm11553-201ENSMUST00000120682 240 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm11257-201ENSMUST00000121313 315 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Col18a1P39061 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm37072-201ENSMUST00000194570 837 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm2602-201ENSMUST00000202112 571 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC10.01□□□□□ -0.81
Col18a1P39061 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Col18a1P39061 AC124103.1-201ENSMUST00000227564 1027 ntBASIC10.01□□□□□ -0.81
Col18a1P39061 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Gm38169-201ENSMUST00000191822 2539 ntBASIC10□□□□□ -0.81
Col18a1P39061 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Zfp169-207ENSMUST00000177530 4145 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Bcas3-206ENSMUST00000108062 3724 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Col18a1P39061 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Col18a1P39061 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Col18a1P39061 Gm23748-201ENSMUST00000104227 131 ntBASIC10□□□□□ -0.81
Col18a1P39061 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms