Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Gm45088-201ENSMUST00000207066 1408 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
BdnfP21237 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
BdnfP21237 Gm22900-201ENSMUST00000104538 130 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Gm13771-201ENSMUST00000117988 238 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm11649-201ENSMUST00000118214 375 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm11676-201ENSMUST00000120443 490 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Gm22484-201ENSMUST00000157992 306 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
BdnfP21237 Gm17157-201ENSMUST00000172397 348 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.56□□□□□ -1.2
BdnfP21237 Gm18353-201ENSMUST00000185906 784 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC7.56□□□□□ -1.2
BdnfP21237 Gm38051-201ENSMUST00000193740 433 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm37450-201ENSMUST00000195218 170 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Gm18988-201ENSMUST00000205601 746 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm45074-201ENSMUST00000209091 1240 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC7.56□□□□□ -1.2
BdnfP21237 AC160338.3-201ENSMUST00000214836 384 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
BdnfP21237 Gm19810-201ENSMUST00000218521 251 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm21941-201ENSMUST00000221121 562 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gm18362-201ENSMUST00000221786 529 ntBASIC7.56□□□□□ -1.2
BdnfP21237 AC154249.1-201ENSMUST00000226296 320 ntBASIC7.56□□□□□ -1.2
BdnfP21237 AC160930.2-201ENSMUST00000226608 303 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
BdnfP21237 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
BdnfP21237 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
BdnfP21237 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
BdnfP21237 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
BdnfP21237 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC7.56□□□□□ -1.2
BdnfP21237 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
BdnfP21237 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC7.56□□□□□ -1.2
BdnfP21237 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Gm20706-201ENSMUST00000175985 2023 ntBASIC7.56□□□□□ -1.2
BdnfP21237 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
BdnfP21237 Gm1982-201ENSMUST00000188615 1887 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
BdnfP21237 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
BdnfP21237 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.55□□□□□ -1.2
BdnfP21237 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 AC121942.3-201ENSMUST00000225768 1436 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Mir705-201ENSMUST00000102058 82 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm26012-201ENSMUST00000104411 128 ntBASIC7.55□□□□□ -1.2
BdnfP21237 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm15572-201ENSMUST00000119248 593 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm12170-201ENSMUST00000119281 300 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm11763-201ENSMUST00000119964 312 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC7.55□□□□□ -1.2
BdnfP21237 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC7.55□□□□□ -1.2
BdnfP21237 Gm6047-201ENSMUST00000167221 574 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm3275-201ENSMUST00000169145 487 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC7.55□□□□□ -1.2
BdnfP21237 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC7.55□□□□□ -1.2
BdnfP21237 Gm23413-201ENSMUST00000175521 125 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.55□□□□□ -1.2
BdnfP21237 2210420H20Rik-201ENSMUST00000188435 629 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Gm42525-201ENSMUST00000196257 527 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC7.55□□□□□ -1.2
BdnfP21237 Gm42824-201ENSMUST00000199361 247 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Gm43069-201ENSMUST00000201006 859 ntTSL 3 BASIC7.55□□□□□ -1.2
BdnfP21237 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC7.55□□□□□ -1.2
BdnfP21237 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC7.55□□□□□ -1.2
BdnfP21237 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC7.55□□□□□ -1.2
BdnfP21237 Gnpnat1-202ENSMUST00000226276 710 ntBASIC7.55□□□□□ -1.2
BdnfP21237 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
BdnfP21237 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms