Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm23908-201ENSMUST00000104599 132 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm12460-201ENSMUST00000117147 357 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm14561-201ENSMUST00000117376 798 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm12736-201ENSMUST00000119330 236 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm13576-201ENSMUST00000120851 778 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm11307-201ENSMUST00000121088 929 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm25735-201ENSMUST00000175164 215 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 1110059E24Rik-202ENSMUST00000177577 599 ntTSL 3 BASIC6.22□□□□□ -1.41
Hmgb3O54879 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Olfr10-201ENSMUST00000187570 942 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm29143-201ENSMUST00000189462 201 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm43287-201ENSMUST00000197747 600 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm19175-201ENSMUST00000199895 916 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm5037-201ENSMUST00000205327 618 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm44508-201ENSMUST00000206943 1157 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm8489-201ENSMUST00000209876 1152 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 AC164614.1-201ENSMUST00000216038 397 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm7695-201ENSMUST00000220900 641 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 AC165157.2-201ENSMUST00000222265 367 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 AC165155.1-201ENSMUST00000228932 445 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Tmem14a-201ENSMUST00000027064 1261 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Ucma-201ENSMUST00000027978 756 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Snora74a-201ENSMUST00000083715 196 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Mir146b-201ENSMUST00000093619 109 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm37675-201ENSMUST00000192303 2847 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.22□□□□□ -1.41
Hmgb3O54879 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Asic5-202ENSMUST00000107736 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hmgb3O54879 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hmgb3O54879 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Hmgb3O54879 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Hmgb3O54879 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Hmgb3O54879 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.21□□□□□ -1.41
Hmgb3O54879 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Hmgb3O54879 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.21□□□□□ -1.42
Hmgb3O54879 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Ighv1-55-201ENSMUST00000103526 415 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Crisp4-203ENSMUST00000115344 960 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm14519-201ENSMUST00000118490 312 ntBASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm12780-201ENSMUST00000122458 645 ntBASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hmgb3O54879 AF067061-202ENSMUST00000181748 881 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm2981-201ENSMUST00000213947 694 ntBASIC6.21□□□□□ -1.42
Hmgb3O54879 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hmgb3O54879 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC6.21□□□□□ -1.42
Hmgb3O54879 AC211878.7-201ENSMUST00000222851 661 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms