Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Gm37069-201ENSMUST00000192742 4142 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Kpna6-202ENSMUST00000102590 5710 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Gm22707-201ENSMUST00000103834 110 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Gm12903-201ENSMUST00000121015 544 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Gm14787-201ENSMUST00000121236 388 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Gm26183-201ENSMUST00000157685 139 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Mir6403-201ENSMUST00000185007 129 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Gm28070-201ENSMUST00000191502 445 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Gm43926-201ENSMUST00000203978 430 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 AC153152.2-201ENSMUST00000223165 959 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 CT010453.2-201ENSMUST00000227005 483 ntBASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Col4a6B1AVK5 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 AC159196.3-201ENSMUST00000224307 1841 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Net1-202ENSMUST00000099946 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm44116-201ENSMUST00000204269 1525 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Arhgap6-205ENSMUST00000112131 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm6640-201ENSMUST00000120629 1587 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm36938-201ENSMUST00000191612 2696 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm26429-201ENSMUST00000104829 110 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm25505-201ENSMUST00000157220 246 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm6428-201ENSMUST00000161062 345 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm17022-201ENSMUST00000166415 922 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm18808-201ENSMUST00000173316 462 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm27156-201ENSMUST00000184589 754 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm29008-201ENSMUST00000189387 298 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm43546-201ENSMUST00000196721 943 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm42713-201ENSMUST00000202709 945 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm45136-201ENSMUST00000205793 943 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Ncor1-202ENSMUST00000037575 4246 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Serinc3-201ENSMUST00000017851 3683 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Gm44531-201ENSMUST00000208364 2000 ntBASIC7.82□□□□□ -1.16
Col4a6B1AVK5 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Lpin1-202ENSMUST00000111067 5433 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Col4a6B1AVK5 Pdgfra-208ENSMUST00000202681 2876 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Rho-201ENSMUST00000032471 4621 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm10568-201ENSMUST00000193244 1634 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm16026-205ENSMUST00000162923 641 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm9286-201ENSMUST00000173586 508 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gm18960-201ENSMUST00000222962 713 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 AC159205.7-201ENSMUST00000225988 692 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 n-R5s29-201ENSMUST00000082836 119 ntBASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Col4a6B1AVK5 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms