Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm43103-201ENSMUST00000199021 802 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm42793-201ENSMUST00000199139 1252 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Lyrm1-207ENSMUST00000208202 936 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm20948-201ENSMUST00000211091 449 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 AC123944.1-201ENSMUST00000213414 160 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm2981-201ENSMUST00000213947 694 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 AC140409.1-202ENSMUST00000216792 432 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm6869-201ENSMUST00000220334 734 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 AC163621.1-201ENSMUST00000220695 379 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm33929-201ENSMUST00000221762 367 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm8278-201ENSMUST00000222840 1121 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 AC117797.2-201ENSMUST00000224419 531 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 AC131100.1-201ENSMUST00000226328 470 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Kctd21-201ENSMUST00000054107 2966 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm25586-201ENSMUST00000082499 112 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm10744-201ENSMUST00000220184 2706 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Tcaf1-203ENSMUST00000121083 3342 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm5533-201ENSMUST00000070987 1343 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Stn1-207ENSMUST00000182808 1618 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Tm4sf1-202ENSMUST00000171384 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm8138-201ENSMUST00000169473 1404 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Gm8165-201ENSMUST00000095981 1404 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Trim39Q9ESN2 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Brinp3-205ENSMUST00000166814 2760 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm4907-201ENSMUST00000116614 1493 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 CT009515.4-201ENSMUST00000228165 1494 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Sytl4-201ENSMUST00000033608 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm11346-203ENSMUST00000135889 2832 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Cecr2-201ENSMUST00000100993 4849 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Ufm1-203ENSMUST00000146598 4890 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Ect2l-205ENSMUST00000209178 2586 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm36952-201ENSMUST00000194923 3625 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Pgk2-201ENSMUST00000033585 1592 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm29113-201ENSMUST00000185991 3432 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Oprm1-217ENSMUST00000105615 1258 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gngt2-204ENSMUST00000107709 587 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Snord88c-201ENSMUST00000116853 90 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm12598-201ENSMUST00000117333 830 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm13902-201ENSMUST00000120168 605 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm16458-201ENSMUST00000121428 502 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm24840-201ENSMUST00000122603 147 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm24190-201ENSMUST00000157976 216 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Olfr331-202ENSMUST00000170501 957 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm26957-201ENSMUST00000182645 977 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm6445-201ENSMUST00000189515 1112 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Cdk2ap1-205ENSMUST00000196910 483 ntAPPRIS ALT1 TSL 2 BASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Igkv9-119-201ENSMUST00000200307 353 ntBASIC7.94□□□□□ -1.14
Trim39Q9ESN2 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms