Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 AC126028.1-201ENSMUST00000226218 2123 ntBASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Nup88Q8CEC0 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm45354-201ENSMUST00000199820 2557 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Mir763-201ENSMUST00000103249 120 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm12306-201ENSMUST00000117256 171 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm11969-201ENSMUST00000118848 356 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm14016-201ENSMUST00000119095 486 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Fau-ps2-201ENSMUST00000119333 371 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm6689-201ENSMUST00000130905 481 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm24738-201ENSMUST00000158856 123 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm17129-201ENSMUST00000168168 505 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm24576-201ENSMUST00000175508 248 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm28980-201ENSMUST00000187877 219 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm17875-201ENSMUST00000216005 941 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gm16391-201ENSMUST00000086601 447 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Dennd6a-205ENSMUST00000224378 2424 ntBASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Nup88Q8CEC0 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm9877-201ENSMUST00000064271 2627 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm24472-201ENSMUST00000104484 132 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm12460-201ENSMUST00000117147 357 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm8688-201ENSMUST00000118240 969 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm14036-201ENSMUST00000118248 480 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm23117-201ENSMUST00000158482 108 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm37392-201ENSMUST00000192098 516 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm34701-201ENSMUST00000204213 849 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm5307-201ENSMUST00000204772 760 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 4933432K03Rik-201ENSMUST00000205739 1247 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Olfr220-201ENSMUST00000085861 978 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Gm3203-201ENSMUST00000197670 2389 ntBASIC9.09□□□□□ -0.95
Nup88Q8CEC0 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Nup88Q8CEC0 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.09□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms