Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm37446-201ENSMUST00000193015 4136 ntBASIC7.85□□□□□ -1.15
HttP42859 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC7.85□□□□□ -1.15
HttP42859 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.85□□□□□ -1.15
HttP42859 Gm42760-201ENSMUST00000199814 311 ntBASIC7.85□□□□□ -1.15
HttP42859 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.85□□□□□ -1.15
HttP42859 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
HttP42859 CT009495.1-201ENSMUST00000224221 862 ntBASIC7.85□□□□□ -1.15
HttP42859 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
HttP42859 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Gm44937-201ENSMUST00000207705 2691 ntBASIC7.84□□□□□ -1.15
HttP42859 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC7.84□□□□□ -1.15
HttP42859 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Prepl-201ENSMUST00000072406 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
HttP42859 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Gm24011-201ENSMUST00000157732 268 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm27960-201ENSMUST00000183445 184 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm8101-201ENSMUST00000192796 478 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.84□□□□□ -1.15
HttP42859 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.84□□□□□ -1.15
HttP42859 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
HttP42859 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.84□□□□□ -1.15
HttP42859 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
HttP42859 Ednrb-201ENSMUST00000022718 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Gm37785-201ENSMUST00000195783 2408 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm25724-201ENSMUST00000104531 117 ntBASIC7.84□□□□□ -1.15
HttP42859 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
HttP42859 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.84□□□□□ -1.15
HttP42859 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Snora47-201ENSMUST00000157483 138 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm25906-201ENSMUST00000158489 126 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm6428-201ENSMUST00000161062 345 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm8540-201ENSMUST00000168952 732 ntBASIC7.84□□□□□ -1.15
HttP42859 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
HttP42859 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
HttP42859 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC7.84□□□□□ -1.15
HttP42859 Gm44342-201ENSMUST00000196874 129 ntBASIC7.84□□□□□ -1.15
HttP42859 Gm44383-201ENSMUST00000198940 129 ntBASIC7.84□□□□□ -1.15
HttP42859 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Gm31166-201ENSMUST00000209326 288 ntBASIC7.84□□□□□ -1.15
HttP42859 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.84□□□□□ -1.15
HttP42859 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
HttP42859 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
HttP42859 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.84□□□□□ -1.16
HttP42859 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
HttP42859 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
HttP42859 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
HttP42859 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.83□□□□□ -1.16
HttP42859 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Fam19a3-201ENSMUST00000139783 4316 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Gm14865-201ENSMUST00000117523 494 ntBASIC7.83□□□□□ -1.16
HttP42859 Gm2986-201ENSMUST00000121603 382 ntBASIC7.83□□□□□ -1.16
HttP42859 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.83□□□□□ -1.16
HttP42859 Gm26505-201ENSMUST00000176208 166 ntBASIC7.83□□□□□ -1.16
HttP42859 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.83□□□□□ -1.16
HttP42859 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC7.83□□□□□ -1.16
HttP42859 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.83□□□□□ -1.16
HttP42859 Gm2221-201ENSMUST00000209342 418 ntBASIC7.83□□□□□ -1.16
HttP42859 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC7.83□□□□□ -1.16
HttP42859 Gm5055-201ENSMUST00000215697 581 ntBASIC7.83□□□□□ -1.16
HttP42859 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
HttP42859 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Gm42700-201ENSMUST00000199071 2437 ntBASIC7.83□□□□□ -1.16
HttP42859 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
HttP42859 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.83□□□□□ -1.16
HttP42859 Tbc1d24-214ENSMUST00000201960 4305 ntTSL 5 BASIC7.83□□□□□ -1.16
HttP42859 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.83□□□□□ -1.16
HttP42859 Gm22882-201ENSMUST00000157749 124 ntBASIC7.83□□□□□ -1.16
HttP42859 Gm27210-201ENSMUST00000184263 402 ntBASIC7.83□□□□□ -1.16
HttP42859 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms