Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.25□□□□□ -1.09
Usp4P35123 CT009539.1-201ENSMUST00000226465 220 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 AC112680.1-201ENSMUST00000215435 1349 ntBASIC8.25□□□□□ -1.09
Usp4P35123 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Usp4P35123 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Usp4P35123 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
Usp4P35123 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC8.24□□□□□ -1.09
Usp4P35123 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Usp4P35123 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Gm12034-201ENSMUST00000119032 399 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Gm11622-201ENSMUST00000120525 691 ntBASIC8.24□□□□□ -1.09
Usp4P35123 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC8.24□□□□□ -1.09
Usp4P35123 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp4P35123 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp4P35123 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp4P35123 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp4P35123 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Gm26977-201ENSMUST00000183151 996 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Gm6123-201ENSMUST00000193658 1069 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Gm37709-201ENSMUST00000195074 600 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Gm42640-201ENSMUST00000199792 1195 ntBASIC8.24□□□□□ -1.09
Usp4P35123 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Gm45353-201ENSMUST00000210581 252 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 AC154424.1-201ENSMUST00000225883 799 ntBASIC8.24□□□□□ -1.09
Usp4P35123 AC101831.1-201ENSMUST00000228245 691 ntBASIC8.24□□□□□ -1.09
Usp4P35123 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Usp4P35123 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Usp4P35123 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.24□□□□□ -1.09
Usp4P35123 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp4P35123 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Gm23358-201ENSMUST00000103887 110 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Gm7350-201ENSMUST00000120964 636 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Defa-ps10-201ENSMUST00000121649 171 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Gm11838-201ENSMUST00000121999 231 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 Gm28980-201ENSMUST00000187877 219 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Gm28877-201ENSMUST00000191349 604 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp4P35123 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC8.23□□□□□ -1.09
Usp4P35123 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.23□□□□□ -1.09
Usp4P35123 AC160112.1-201ENSMUST00000219139 714 ntBASIC8.23□□□□□ -1.09
Usp4P35123 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp4P35123 AC151902.1-201ENSMUST00000227800 375 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms