Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm5538W4VSP6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.04■□□□□ 0.64
Gm5538W4VSP6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm5538W4VSP6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Gm5538W4VSP6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Gm5538W4VSP6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Gm5538W4VSP6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Gm42569-201ENSMUST00000200539 472 ntBASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Gm5538W4VSP6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5538W4VSP6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5538W4VSP6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5538W4VSP6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5538W4VSP6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Gm5538W4VSP6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.02■□□□□ 0.64
Gm5538W4VSP6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Gm5538W4VSP6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Gm5538W4VSP6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm5538W4VSP6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm5538W4VSP6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm5538W4VSP6 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.01■□□□□ 0.63
Gm5538W4VSP6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm5538W4VSP6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Gm5538W4VSP6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm5538W4VSP6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gm5538W4VSP6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gm5538W4VSP6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19■□□□□ 0.63
Gm5538W4VSP6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm5538W4VSP6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm5538W4VSP6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19■□□□□ 0.63
Gm5538W4VSP6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19■□□□□ 0.63
Gm5538W4VSP6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gm5538W4VSP6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Gm5538W4VSP6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gm5538W4VSP6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gm5538W4VSP6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Gm5538W4VSP6 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gm5538W4VSP6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm5538W4VSP6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm5538W4VSP6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Gm5538W4VSP6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gm5538W4VSP6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Gm5538W4VSP6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm5538W4VSP6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm5538W4VSP6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gm5538W4VSP6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gm5538W4VSP6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms