Protein–RNA interactions for Protein: Q9R194

Cry2, Cryptochrome-2, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cry2Q9R194 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cry2Q9R194 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cry2Q9R194 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
Cry2Q9R194 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Cry2Q9R194 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cry2Q9R194 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cry2Q9R194 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cry2Q9R194 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cry2Q9R194 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.38■■□□□ 1.01
Cry2Q9R194 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cry2Q9R194 Gm15375-201ENSMUST00000119510 849 ntBASIC21.37■■□□□ 1.01
Cry2Q9R194 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.37■■□□□ 1.01
Cry2Q9R194 Gm38285-201ENSMUST00000192928 922 ntBASIC21.37■■□□□ 1.01
Cry2Q9R194 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cry2Q9R194 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cry2Q9R194 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cry2Q9R194 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cry2Q9R194 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cry2Q9R194 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Cry2Q9R194 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cry2Q9R194 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cry2Q9R194 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cry2Q9R194 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cry2Q9R194 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Cry2Q9R194 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.36■■□□□ 1.01
Cry2Q9R194 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.36■■□□□ 1.01
Cry2Q9R194 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.36■■□□□ 1.01
Cry2Q9R194 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.36■■□□□ 1.01
Cry2Q9R194 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cry2Q9R194 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.36■■□□□ 1.01
Cry2Q9R194 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cry2Q9R194 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cry2Q9R194 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cry2Q9R194 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.35■■□□□ 1.01
Cry2Q9R194 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.35■■□□□ 1.01
Cry2Q9R194 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.35■■□□□ 1.01
Cry2Q9R194 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cry2Q9R194 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cry2Q9R194 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cry2Q9R194 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cry2Q9R194 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cry2Q9R194 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cry2Q9R194 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cry2Q9R194 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cry2Q9R194 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cry2Q9R194 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cry2Q9R194 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cry2Q9R194 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Cry2Q9R194 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cry2Q9R194 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cry2Q9R194 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cry2Q9R194 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Cry2Q9R194 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cry2Q9R194 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.33■■□□□ 1.01
Cry2Q9R194 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.33■■□□□ 1.01
Cry2Q9R194 Odf3b-204ENSMUST00000227834 930 ntBASIC21.33■■□□□ 1.01
Cry2Q9R194 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cry2Q9R194 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cry2Q9R194 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cry2Q9R194 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cry2Q9R194 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cry2Q9R194 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.33■■□□□ 1
Cry2Q9R194 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cry2Q9R194 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Cry2Q9R194 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cry2Q9R194 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Cry2Q9R194 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.32■■□□□ 1
Cry2Q9R194 Gm37292-201ENSMUST00000192062 758 ntBASIC21.32■■□□□ 1
Cry2Q9R194 Gm42545-201ENSMUST00000202755 922 ntBASIC21.32■■□□□ 1
Cry2Q9R194 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cry2Q9R194 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cry2Q9R194 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cry2Q9R194 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cry2Q9R194 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cry2Q9R194 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cry2Q9R194 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cry2Q9R194 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.31■■□□□ 1
Cry2Q9R194 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Cry2Q9R194 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.31■■□□□ 1
Cry2Q9R194 Gm30025-201ENSMUST00000218555 728 ntBASIC21.31■■□□□ 1
Cry2Q9R194 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Cry2Q9R194 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cry2Q9R194 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cry2Q9R194 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cry2Q9R194 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Cry2Q9R194 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cry2Q9R194 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Cry2Q9R194 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cry2Q9R194 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cry2Q9R194 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cry2Q9R194 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cry2Q9R194 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cry2Q9R194 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cry2Q9R194 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cry2Q9R194 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cry2Q9R194 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cry2Q9R194 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cry2Q9R194 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cry2Q9R194 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cry2Q9R194 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms