Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Msh5Q9QUM7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Msh5Q9QUM7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Msh5Q9QUM7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Msh5Q9QUM7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Msh5Q9QUM7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Gm15039-201ENSMUST00000118914 875 ntBASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.86■□□□□ 0.61
Msh5Q9QUM7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Msh5Q9QUM7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Msh5Q9QUM7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.84■□□□□ 0.61
Msh5Q9QUM7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh5Q9QUM7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh5Q9QUM7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Msh5Q9QUM7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh5Q9QUM7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Msh5Q9QUM7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.83■□□□□ 0.6
Msh5Q9QUM7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Msh5Q9QUM7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Msh5Q9QUM7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms