Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rfx5Q9JL61 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.73■□□□□ 0.75
Rfx5Q9JL61 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rfx5Q9JL61 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rfx5Q9JL61 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx5Q9JL61 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx5Q9JL61 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.7■□□□□ 0.74
Rfx5Q9JL61 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Rfx5Q9JL61 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.7■□□□□ 0.74
Rfx5Q9JL61 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.7■□□□□ 0.74
Rfx5Q9JL61 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx5Q9JL61 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rfx5Q9JL61 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx5Q9JL61 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx5Q9JL61 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rfx5Q9JL61 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.69■□□□□ 0.74
Rfx5Q9JL61 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx5Q9JL61 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx5Q9JL61 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rfx5Q9JL61 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx5Q9JL61 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rfx5Q9JL61 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Gm26524-201ENSMUST00000192339 390 ntBASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rfx5Q9JL61 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx5Q9JL61 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.67■□□□□ 0.74
Rfx5Q9JL61 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx5Q9JL61 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rfx5Q9JL61 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rfx5Q9JL61 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.67■□□□□ 0.74
Rfx5Q9JL61 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx5Q9JL61 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rfx5Q9JL61 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.67■□□□□ 0.74
Rfx5Q9JL61 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.67■□□□□ 0.74
Rfx5Q9JL61 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rfx5Q9JL61 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms