Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne8Q9DC53 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne8Q9DC53 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne8Q9DC53 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.45■□□□□ 0.7
Cpne8Q9DC53 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne8Q9DC53 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne8Q9DC53 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne8Q9DC53 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cpne8Q9DC53 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.43■□□□□ 0.7
Cpne8Q9DC53 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Gm13146-201ENSMUST00000118508 780 ntBASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Cpne8Q9DC53 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.41■□□□□ 0.7
Cpne8Q9DC53 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne8Q9DC53 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne8Q9DC53 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne8Q9DC53 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne8Q9DC53 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne8Q9DC53 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.4■□□□□ 0.7
Cpne8Q9DC53 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpne8Q9DC53 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cpne8Q9DC53 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpne8Q9DC53 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cpne8Q9DC53 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpne8Q9DC53 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpne8Q9DC53 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cpne8Q9DC53 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpne8Q9DC53 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms