Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rsph9Q9D9V4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rsph9Q9D9V4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.19■□□□□ 0.5
Rsph9Q9D9V4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rsph9Q9D9V4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Rsph9Q9D9V4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rsph9Q9D9V4 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Gm8520-201ENSMUST00000186517 868 ntBASIC18.15■□□□□ 0.5
Rsph9Q9D9V4 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms