Protein–RNA interactions for Protein: Q9D9Q6

Calr3, Calreticulin-3, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calr3Q9D9Q6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Calr3Q9D9Q6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Calr3Q9D9Q6 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Calr3Q9D9Q6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Gm11175-201ENSMUST00000116172 543 ntBASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Calr3Q9D9Q6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Calr3Q9D9Q6 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Calr3Q9D9Q6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Calr3Q9D9Q6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Calr3Q9D9Q6 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
Calr3Q9D9Q6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Calr3Q9D9Q6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Calr3Q9D9Q6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Calr3Q9D9Q6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Calr3Q9D9Q6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Gm13238-201ENSMUST00000117655 780 ntBASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Calr3Q9D9Q6 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
Calr3Q9D9Q6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Calr3Q9D9Q6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Calr3Q9D9Q6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Calr3Q9D9Q6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Calr3Q9D9Q6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Calr3Q9D9Q6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms