Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb4aQ9D6F9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb4aQ9D6F9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.09■□□□□ 0.81
Tubb4aQ9D6F9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb4aQ9D6F9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Tubb4aQ9D6F9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tubb4aQ9D6F9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Tubb4aQ9D6F9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Tubb4aQ9D6F9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tubb4aQ9D6F9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubb4aQ9D6F9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubb4aQ9D6F9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubb4aQ9D6F9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubb4aQ9D6F9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tubb4aQ9D6F9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb4aQ9D6F9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb4aQ9D6F9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb4aQ9D6F9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb4aQ9D6F9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.07■□□□□ 0.8
Tubb4aQ9D6F9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb4aQ9D6F9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb4aQ9D6F9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Tubb4aQ9D6F9 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb4aQ9D6F9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.05■□□□□ 0.8
Tubb4aQ9D6F9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Tubb4aQ9D6F9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb4aQ9D6F9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb4aQ9D6F9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Tubb4aQ9D6F9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb4aQ9D6F9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb4aQ9D6F9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb4aQ9D6F9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb4aQ9D6F9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb4aQ9D6F9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb4aQ9D6F9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.02■□□□□ 0.79
Tubb4aQ9D6F9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.02■□□□□ 0.79
Tubb4aQ9D6F9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tubb4aQ9D6F9 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.01■□□□□ 0.79
Tubb4aQ9D6F9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubb4aQ9D6F9 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms