Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Snx29Q9D3S3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx29Q9D3S3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Snx29Q9D3S3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Gm37055-201ENSMUST00000191866 133 ntBASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Snx29Q9D3S3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Snx29Q9D3S3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Snx29Q9D3S3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.52■□□□□ 0.88
Snx29Q9D3S3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Snx29Q9D3S3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Snx29Q9D3S3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Snx29Q9D3S3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Snx29Q9D3S3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Snx29Q9D3S3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx29Q9D3S3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx29Q9D3S3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.51■□□□□ 0.87
Snx29Q9D3S3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.51■□□□□ 0.87
Snx29Q9D3S3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx29Q9D3S3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Snx29Q9D3S3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Zfp783-201ENSMUST00000095946 670 ntBASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Snx29Q9D3S3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Snx29Q9D3S3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Snx29Q9D3S3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Gm15565-201ENSMUST00000118890 427 ntBASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Snx29Q9D3S3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.46■□□□□ 0.87
Snx29Q9D3S3 Golph3-202ENSMUST00000226517 2359 ntBASIC20.46■□□□□ 0.87
Snx29Q9D3S3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Snx29Q9D3S3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms