Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.37■□□□□ 0.21
Raet1eQ9CZQ6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Raet1eQ9CZQ6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Raet1eQ9CZQ6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Raet1eQ9CZQ6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Raet1eQ9CZQ6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Raet1eQ9CZQ6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Raet1eQ9CZQ6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Raet1eQ9CZQ6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Raet1eQ9CZQ6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Raet1eQ9CZQ6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Raet1eQ9CZQ6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Raet1eQ9CZQ6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Raet1eQ9CZQ6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Gm8969-201ENSMUST00000199694 526 ntBASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Raet1eQ9CZQ6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Raet1eQ9CZQ6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
Raet1eQ9CZQ6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms