Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Gm15546-201ENSMUST00000122095 826 ntBASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx47Q9CWX9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx47Q9CWX9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx47Q9CWX9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx47Q9CWX9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx47Q9CWX9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
Ddx47Q9CWX9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
Ddx47Q9CWX9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx47Q9CWX9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ddx47Q9CWX9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.08■□□□□ 0.64
Ddx47Q9CWX9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx47Q9CWX9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Ddx47Q9CWX9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx47Q9CWX9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx47Q9CWX9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms