Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Khdc3Q9CWU5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Khdc3Q9CWU5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Khdc3Q9CWU5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Khdc3Q9CWU5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Khdc3Q9CWU5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Khdc3Q9CWU5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Khdc3Q9CWU5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Khdc3Q9CWU5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Khdc3Q9CWU5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Khdc3Q9CWU5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Khdc3Q9CWU5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Khdc3Q9CWU5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Khdc3Q9CWU5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Khdc3Q9CWU5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Khdc3Q9CWU5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Gm10493-201ENSMUST00000097270 612 ntBASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Khdc3Q9CWU5 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Gm42778-201ENSMUST00000199644 553 ntBASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.79■□□□□ 0.44
Khdc3Q9CWU5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms