Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Msantd3Q9CR78 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Gm22325-201ENSMUST00000158904 308 ntBASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Msantd3Q9CR78 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Msantd3Q9CR78 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.79■□□□□ 0.44
Msantd3Q9CR78 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Msantd3Q9CR78 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Msantd3Q9CR78 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Msantd3Q9CR78 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msantd3Q9CR78 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Msantd3Q9CR78 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Gm11249-201ENSMUST00000117071 859 ntBASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.76■□□□□ 0.43
Msantd3Q9CR78 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms