Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim11Q99PQ2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim11Q99PQ2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim11Q99PQ2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC21.19■□□□□ 0.98
Trim11Q99PQ2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim11Q99PQ2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim11Q99PQ2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Reep4-203ENSMUST00000226563 1444 ntBASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim11Q99PQ2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim11Q99PQ2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim11Q99PQ2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim11Q99PQ2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim11Q99PQ2 Gm13146-201ENSMUST00000118508 780 ntBASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim11Q99PQ2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim11Q99PQ2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim11Q99PQ2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim11Q99PQ2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms