Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim16Q99PP9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim16Q99PP9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim16Q99PP9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim16Q99PP9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim16Q99PP9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim16Q99PP9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim16Q99PP9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Gm10493-201ENSMUST00000097270 612 ntBASIC18.11■□□□□ 0.49
Trim16Q99PP9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.11■□□□□ 0.49
Trim16Q99PP9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.11■□□□□ 0.49
Trim16Q99PP9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim16Q99PP9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Gm18284-201ENSMUST00000172604 624 ntBASIC18.1■□□□□ 0.49
Trim16Q99PP9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim16Q99PP9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim16Q99PP9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trim16Q99PP9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trim16Q99PP9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim16Q99PP9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim16Q99PP9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim16Q99PP9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Trim16Q99PP9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim16Q99PP9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim16Q99PP9 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.07■□□□□ 0.48
Trim16Q99PP9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim16Q99PP9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim16Q99PP9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.07■□□□□ 0.48
Trim16Q99PP9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
Trim16Q99PP9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.07■□□□□ 0.48
Trim16Q99PP9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim16Q99PP9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim16Q99PP9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim16Q99PP9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim16Q99PP9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Trim16Q99PP9 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.06■□□□□ 0.48
Trim16Q99PP9 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms