Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh15Q99PJ1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh15Q99PJ1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh15Q99PJ1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh15Q99PJ1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh15Q99PJ1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh15Q99PJ1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh15Q99PJ1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh15Q99PJ1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh15Q99PJ1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.4■■□□□ 1.02
Pcdh15Q99PJ1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdh15Q99PJ1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pcdh15Q99PJ1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh15Q99PJ1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh15Q99PJ1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Pcdh15Q99PJ1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh15Q99PJ1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh15Q99PJ1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh15Q99PJ1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh15Q99PJ1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh15Q99PJ1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh15Q99PJ1 AA414768-201ENSMUST00000121924 1257 ntBASIC21.38■■□□□ 1.01
Pcdh15Q99PJ1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh15Q99PJ1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdh15Q99PJ1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh15Q99PJ1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Pcdh15Q99PJ1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh15Q99PJ1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Pcdh15Q99PJ1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh15Q99PJ1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh15Q99PJ1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh15Q99PJ1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh15Q99PJ1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.37■■□□□ 1.01
Pcdh15Q99PJ1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdh15Q99PJ1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh15Q99PJ1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh15Q99PJ1 Gm17971-201ENSMUST00000190239 806 ntBASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh15Q99PJ1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh15Q99PJ1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Pcdh15Q99PJ1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh15Q99PJ1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh15Q99PJ1 Gm9103-201ENSMUST00000119371 405 ntBASIC21.34■■□□□ 1.01
Pcdh15Q99PJ1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh15Q99PJ1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh15Q99PJ1 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.34■■□□□ 1.01
Pcdh15Q99PJ1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh15Q99PJ1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh15Q99PJ1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.33■■□□□ 1.01
Pcdh15Q99PJ1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.33■■□□□ 1
Pcdh15Q99PJ1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pcdh15Q99PJ1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdh15Q99PJ1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdh15Q99PJ1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pcdh15Q99PJ1 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdh15Q99PJ1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC21.33■■□□□ 1
Pcdh15Q99PJ1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdh15Q99PJ1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdh15Q99PJ1 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.32■■□□□ 1
Pcdh15Q99PJ1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdh15Q99PJ1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdh15Q99PJ1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.32■■□□□ 1
Pcdh15Q99PJ1 Gm38285-201ENSMUST00000192928 922 ntBASIC21.32■■□□□ 1
Pcdh15Q99PJ1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms