Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clp1Q99LI9 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.74■□□□□ 0.75
Clp1Q99LI9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clp1Q99LI9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Gm21814-202ENSMUST00000203277 873 ntBASIC19.73■□□□□ 0.75
Clp1Q99LI9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clp1Q99LI9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clp1Q99LI9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clp1Q99LI9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.71■□□□□ 0.75
Clp1Q99LI9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Zfp783-201ENSMUST00000095946 670 ntBASIC19.71■□□□□ 0.75
Clp1Q99LI9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.71■□□□□ 0.75
Clp1Q99LI9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clp1Q99LI9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clp1Q99LI9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Clp1Q99LI9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clp1Q99LI9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Clp1Q99LI9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clp1Q99LI9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clp1Q99LI9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clp1Q99LI9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clp1Q99LI9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clp1Q99LI9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.69■□□□□ 0.74
Clp1Q99LI9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.69■□□□□ 0.74
Clp1Q99LI9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clp1Q99LI9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Gm43183-201ENSMUST00000200632 547 ntBASIC19.68■□□□□ 0.74
Clp1Q99LI9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Mtag2-201ENSMUST00000058665 714 ntBASIC19.68■□□□□ 0.74
Clp1Q99LI9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Clp1Q99LI9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clp1Q99LI9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Gm10138-203ENSMUST00000206952 366 ntBASIC19.67■□□□□ 0.74
Clp1Q99LI9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clp1Q99LI9 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms