Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clcc1Q99LI2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Rab3c-203ENSMUST00000224180 967 ntBASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcc1Q99LI2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Gm37856-201ENSMUST00000191634 999 ntBASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.36■□□□□ 0.53
Clcc1Q99LI2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Clcc1Q99LI2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcc1Q99LI2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcc1Q99LI2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clcc1Q99LI2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Clcc1Q99LI2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcc1Q99LI2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcc1Q99LI2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcc1Q99LI2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcc1Q99LI2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcc1Q99LI2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcc1Q99LI2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcc1Q99LI2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcc1Q99LI2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Gm13168-201ENSMUST00000121771 632 ntBASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Gm8520-201ENSMUST00000186517 868 ntBASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.32■□□□□ 0.52
Clcc1Q99LI2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Trmt13-210ENSMUST00000198454 880 ntBASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Clcc1Q99LI2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms