Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Usp11Q99K46 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Usp11Q99K46 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Usp11Q99K46 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp11Q99K46 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp11Q99K46 Gm8495-201ENSMUST00000188740 694 ntBASIC19.53■□□□□ 0.72
Usp11Q99K46 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.53■□□□□ 0.72
Usp11Q99K46 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp11Q99K46 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp11Q99K46 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp11Q99K46 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.53■□□□□ 0.72
Usp11Q99K46 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp11Q99K46 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.53■□□□□ 0.72
Usp11Q99K46 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Usp11Q99K46 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.52■□□□□ 0.72
Usp11Q99K46 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Gm5874-201ENSMUST00000096101 508 ntBASIC19.52■□□□□ 0.72
Usp11Q99K46 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp11Q99K46 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp11Q99K46 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Usp11Q99K46 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp11Q99K46 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Usp11Q99K46 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp11Q99K46 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Usp11Q99K46 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.51■□□□□ 0.71
Usp11Q99K46 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Usp11Q99K46 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.51■□□□□ 0.71
Usp11Q99K46 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp11Q99K46 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp11Q99K46 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp11Q99K46 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp11Q99K46 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.5■□□□□ 0.71
Usp11Q99K46 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.5■□□□□ 0.71
Usp11Q99K46 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.5■□□□□ 0.71
Usp11Q99K46 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp11Q99K46 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Usp11Q99K46 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp11Q99K46 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp11Q99K46 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp11Q99K46 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp11Q99K46 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp11Q99K46 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Usp11Q99K46 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.49■□□□□ 0.71
Usp11Q99K46 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp11Q99K46 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.49■□□□□ 0.71
Usp11Q99K46 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp11Q99K46 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp11Q99K46 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp11Q99K46 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp11Q99K46 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp11Q99K46 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp11Q99K46 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp11Q99K46 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp11Q99K46 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp11Q99K46 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Usp11Q99K46 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp11Q99K46 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp11Q99K46 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Usp11Q99K46 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp11Q99K46 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp11Q99K46 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp11Q99K46 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp11Q99K46 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp11Q99K46 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp11Q99K46 Gm9988-201ENSMUST00000069786 435 ntBASIC19.47■□□□□ 0.71
Usp11Q99K46 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp11Q99K46 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp11Q99K46 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp11Q99K46 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp11Q99K46 Rarb-207ENSMUST00000225921 2756 ntBASIC19.46■□□□□ 0.71
Usp11Q99K46 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp11Q99K46 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp11Q99K46 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp11Q99K46 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp11Q99K46 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms